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Run Error Checking (CHKDSK) on the drive. Get it to scan the surface for bad sectors (CHKDSK E: /r). It may take a long time, so set it to run overnight.
That will mark the sectors as bad, but it does not "fix" the drive. The surrounding disk media will keep breaking down and further bad sectors will appear. A drive I still have had bad sectors from a power blackout. I found a program that shows sectors marked as bad (you could see them in the Windows 98 version of Defragmentation) and I was able to format drives on either side of the damaged sectors and leave that section as free space (actually, I made a small drive on the damaged section, then deleted that drive). The damage was sustained around ten years ago. It works fine.
Matt
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